Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015916083.1_cds_XP_016465775.1_58696
CDS Infomation

[gene=LOC107788603] [db_xref=GeneID:107788603] [protein=V-type proton ATPase subunit B 2 isoform X1] [protein_id=XP_016465775.1] [location=complement(join(21223..21408,21509..21592,21750..21803,21893..21940,23648..23730,23826..23976,24148..24285,24406..24534,25183..25391,25471..25582,26177..26236,26384..26482,26601..26656,26794..26967,27744..27801))] [gbkey=CDS]
Sequence

ATGGGTGCGGAAAACAACAATATTGACATGGAGGAGGGAACCCTGGAGGTTGGAATGGCA
ACTGAAGTAAATATATCAAAATTTTGCTGTACCTTCTGTCTATACACTACAAGGAGGATA
TTCCTACTTTTTGAGGTTTCAGGATTCAATATATCCATTGTCATATCCATTTTCAGTAAC
ATGGCAATCTTGTGGATCATCACATATAACTCCACATCTTTTCTGGCTTTTGAATATAGA
ACTGTCTCAGGTGTTGCTGGACCACTTGTTATTCTCGACAAAGTTAAGGGACCCAAGTAC
CAGGAGATTGTTAACATTCGTTTGGGAGATGGAACAACAAGACGTGGACAAGTTCTGGAA
GTTGATGGGGAAAAAGCTGTTGTTCAGGTTTTTGAAGGAACATCTGGAATTGACAACAAA
TACACAACTGTGCAGTTTACCGGGGAGGTGCTTAAAACACCGGTCTCACTAGATATGCTT
GGACGTATCTTCAATGGTTCAGGGAAGCCTATTGACAATGGTCCTCCAATTTTACCCGAG
GCTTACAGAGATATTTCTGGGAGTTCTATCAACCCTAGTGAGAGAACCTATCCTGAAGAG
ATGATTCAAACAGGAATTTCAACAATTGATGTCATGAATTCAATTGCTAGAGGACAAAAA
ATCCCTCTTTTCTCTGCTGCCGGTCTTCCCCATAATGAAATTGCAGCCCAGATCTGTCGT
CAGGCTGGTTTGGTGAAGAGGTTGGAGAAATCTGAAAATCTTCTTGAGGGTGGTGAAGAC
GACAACTTTGCCATAGTTTTTGCAGCTATGGGAGTCAACATGGAAACAGCTCAATTTTTC
AAACGTGATTTTGAGGAAAATGGATCCATGGAGAGAGTGACACTTTTCTTAAACCTGGCC
AACGATCCCACAATTGAACGTATTATTACTCCCAGGATTGCCCTTACAACTGCCGAATAT
TTAGCATATGAATGTGGCAAGCATGTTCTTGTGATTCTAACTGATATGAGTTCATATGCT
GATGCTCTTCGTGAGGTATCTGCTGCCCGAGAAGAAGTGCCTGGAAGGCGTGGATATCCC
GGTTATATGTATACTGATCTTGCAACCATTTATGAACGAGCTGGACGTATCGAGGGACGG
ACTGGATCTATCACACAGATTCCAATTCTGACCATGCCTAATGATGATATTACACACCCA
ACTCCAGATCTTACTGGTTATATCACTGAAGGACAAATATATATTGACCGACAACTTCAT
AACCGGCAGATATACCCACCAATCAATGTACTTCCATCCCTGTCTCGGTTGATGAAGAGT
GCCATTGGTGAGGGTATGACTAGGAGGGATCATTCTGATGTATCCAACCAGCTGTATGCA
AATTATGCCATTGGAAAGGACGTCCAGGCAATGAAAGCTGTTGTCGGAGAAGAAGCACTT
TCTTCTGAGGACTTGCTGTATTTGGAGTTTCTTGACAAATTTGAGCGGAAATTTGTCGCT
CAAGGAGCCTATGACACACGCAACATATTCCAGTCACTTGATTTAGCATGGACACTCCTT
CGCATCTTCCCTCGTGAGCTACTTCATCGTATCCCAGCAAAGACCCTAGATCAGTATTAC
AGCCGCGATGCATCTAATTGA

Peptide Sequence

PEP ID

XP_016465775.1
PEP Infomation

PREDICTED: V-type proton ATPase subunit B 2 isoform X1 [Nicotiana tabacum]
Sequence

MGAENNNIDMEEGTLEVGMATEVNISKFCCTFCLYTTRRIFLLFEVSGFNISIVISIFSN
MAILWIITYNSTSFLAFEYRTVSGVAGPLVILDKVKGPKYQEIVNIRLGDGTTRRGQVLE
VDGEKAVVQVFEGTSGIDNKYTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPE
AYRDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICR
QAGLVKRLEKSENLLEGGEDDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLA
NDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYP
GYMYTDLATIYERAGRIEGRTGSITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQLH
NRQIYPPINVLPSLSRLMKSAIGEGMTRRDHSDVSNQLYANYAIGKDVQAMKAVVGEEAL
SSEDLLYLEFLDKFERKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDQYY
SRDASN

Transcript Sequence

Gene sequence data has not been registered.